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Genotyping experiment CornellMaster_2013_GBS


Experiment Short NameCornell Master
PlatformGBS restriction site
Data ProgramKansas State Genotyping Lab (KSG)
Breeding ProgramCornell University (CNL)
Processing Date04/29/2013
SoftwarePoland Lab Pipeline
Software versionn/a

48069 markers were assayed for 1128 lines.

(lines and markers)


Removed by filteringRemaining
7375 markers have a minor allele frequency (MAF) less than 5%
44760 markers are missing more than 10% of data
45314 markers removed
2755 markers

Maximum Missing Data: %     Minimum MAF: %    

Additional files available

Samples (germplasm lines)
Manifest (markers used)
Cluster File
Raw data

In 2009 the Toronto International Data Release Workshop agreed on a policy statement about prepublication data sharing. Accordingly, the data producers are making many of the datasets in T3 available prior to publication of a global analysis. Guidelines for appropriate sharing of these data are given in the excerpt from the Toronto Statement

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