Genotyping experiment POGI_2019
Description
| Experiment Short Name | POGI_2019 |
| Platform | GBS PstI-MspI |
| Data Program | AAFC Ottawa: genotype data (OTW-GD) |
| Breeding Program | AAFC Ottawa (OTW) |
| OPA Name | |
| Processing Date | 12/1/19 |
| Software | Haplotag |
| Software version | 2019 |
| Comments | re-called CORE |
240958 markers were assayed for 635 lines.
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| Removed by filtering | Remaining |
| 42166 markers have a minor allele frequency (MAF) less than 5%
227184 markers are missing more than 10% of data 230012 markers removed | 10946 markers |
Maximum Missing Data: %
Minimum MAF: %
Additional files available
| Samples (germplasm lines) | |
| Manifest (markers used) | |
| Cluster File | |
| Raw data | core_haplotag_2019.hmp |