Genotyping experiment POGI_2017
Description
| Experiment Short Name | POGI_2017 |
| Platform | GBS PstI-MspI |
| Data Program | USDA-ARS Fargo: data (FND-GD) |
| Breeding Program | USDA (USD) |
| OPA Name | n/a |
| Processing Date | n/a |
| Software | Haplotag |
| Software version | 2016_02 |
| Comments | SNPs interpreted from haplotype calls. SNP locations are arbitrary - please link to the latest map of GBS markers. |
239612 markers were assayed for 564 lines.
Download
| Removed by filtering | Remaining |
| 91134 markers have a minor allele frequency (MAF) less than 5%
188120 markers are missing more than 10% of data 204682 markers removed | 34930 markers |
Maximum Missing Data: %
Minimum MAF: %
Additional files available
| Samples (germplasm lines) | |
| Manifest (markers used) | |
| Cluster File | |
| Raw data |