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  T3/Barley

Marker 3_1465

Marker name 3_1465
Updated on 2013-07-30 14:44:48
A allele
B allele
Sequence


Marker Types

Marker Type Name
OPA SNP Name View

Annotations

DatasetEntryDataset Description
GrainGenesPOPA3_1465
HARVEST_U3210624Close Lab: HarvEST Assembly 32 Unigene Number
HARVEST_U355362Close Lab: HarvEST Assembly 35 Unigene number
NCBI BLASTN hitAK358912Top BLASTN hit in July 2013
NCBI ProteinIDBAJ90123.1Predicted protein (NCBI) of top BLASTn hit, July 2013
Silent SNPyesDoes the SNP affect the protein product?
Top BLASTN hit speciesHordeum vulgare subsp. vulgareOrganism with the top BLASTN hit in July 2013
U35_PROBE_SETContig13664_atClose Lab, HarvEST Assembly 35, at least 5 matches
U35_PROBE_SETHZ46H23r_s_atClose Lab, HarvEST Assembly 35, at least 5 matches
U35_RICE_DESCRIPTIONprotein gibberellin receptor GID1L2, putative, expressedClose Lab, using HarvEST Barley Assembly 35

Marker Synonyms

ValueName
U35_5362_1110 EST Name View
3_1465 POPA Name View

Allele Information

Line Data: Show alleles for all lines

Map locations

MapChromosomeStartEndBin
UCR_5H5H143.27143.27
OWB_5H5H168.135168.135
MB_5H5H147.22147.22
OPA2011_5H5H138.25138.25
AllSNPs2013_5H5H130.93130.93

Selection List

In 2009 the Toronto International Data Release Workshop agreed on a policy statement about prepublication data sharing. Accordingly, the data producers are making many of the datasets in T3 available prior to publication of a global analysis. Guidelines for appropriate sharing of these data are given in the excerpt from the Toronto Statement

I agree to the Data Usage Policy as specified in Toronto Statement.