Contact Us

  T3/Barley

Marker 3_1419

Marker name 3_1419
Updated on 2013-07-30 14:44:48
A allele
B allele
Sequence


Marker Types

Marker Type Name
OPA SNP Name View

Annotations

DatasetEntryDataset Description
Gene Short Namerrn4.5Short name of the gene found in the top BLASTN it
GrainGenesPOPA3_1419
HARVEST_U321478Close Lab: HarvEST Assembly 32 Unigene Number
HARVEST_U35419Close Lab: HarvEST Assembly 35 Unigene number
NCBI BLASTN hitJX871942Top BLASTN hit in July 2013
NCBI ProteinIDAFV62970.1Predicted protein (NCBI) of top BLASTn hit, July 2013
Silent SNPyesDoes the SNP affect the protein product?
Top BLASTN hit speciesLolium multiflorumOrganism with the top BLASTN hit in July 2013
U35_PROBE_SETChlorContig11_s_atClose Lab, HarvEST Assembly 35, at least 5 matches
U35_PROBE_SETChlorContig11_x_atClose Lab, HarvEST Assembly 35, at least 5 matches
U35_PROBE_SETContig3364_atClose Lab, HarvEST Assembly 35, at least 5 matches
U35_PROBE_SETHVSMEc0001D14f_x_atClose Lab, HarvEST Assembly 35, at least 5 matches
U35_PROBE_SETHVSMEc0004C11f_x_atClose Lab, HarvEST Assembly 35, at least 5 matches
U35_PROBE_SETHVSMEc0005O17f_x_atClose Lab, HarvEST Assembly 35, at least 5 matches
U35_PROBE_SETHVSMEc0009K16f_s_atClose Lab, HarvEST Assembly 35, at least 5 matches
U35_PROBE_SETHVSMEc0011H17f_x_atClose Lab, HarvEST Assembly 35, at least 5 matches
U35_PROBE_SETMitoContig11_atClose Lab, HarvEST Assembly 35, at least 5 matches
U35_RICE_DESCRIPTIONprotein hypothetical proteinClose Lab, using HarvEST Barley Assembly 35

Marker Synonyms

ValueName
U35_419_427 EST Name View
3_1419 POPA Name View

Allele Information

Line Data: Show alleles for all lines

Map locations

MapChromosomeStartEndBin
UCR_UNKUNK00

Selection List

In 2009 the Toronto International Data Release Workshop agreed on a policy statement about prepublication data sharing. Accordingly, the data producers are making many of the datasets in T3 available prior to publication of a global analysis. Guidelines for appropriate sharing of these data are given in the excerpt from the Toronto Statement

I agree to the Data Usage Policy as specified in Toronto Statement.