Genotyping data by experiment
Trial Code | experiment name | platform | lines | markers | genotype data |
2006BOPA1_AB_Plate5 | AB_Plate5 | GoldenGate | 95 | 1536 | 145,920 |
2006BOPA1_BA_Plate7 | BA_Plate7 | GoldenGate | 96 | 1536 | 147,456 |
2006BOPA1_MN_Plate3 | MN_Plate3 | GoldenGate | 96 | 1536 | 147,456 |
2006BOPA1_MT_Plate10 | MT_Plate10 | GoldenGate | 96 | 1536 | 147,456 |
2006BOPA1_N2_Plate8 | N2_Plate8 | GoldenGate | 96 | 1536 | 147,456 |
2006BOPA1_N6_Plate9 | N6_Plate9 | GoldenGate | 96 | 1536 | 147,456 |
2006BOPA1_OR_Plate2 | OR_Plate2 | GoldenGate | 96 | 1536 | 147,456 |
2006BOPA1_VT_Plate1 | VT_Plate1 | GoldenGate | 96 | 1536 | 147,456 |
2006BOPA1_WA_Plate4 | WA_Plate4 | GoldenGate | 96 | 1536 | 147,456 |
2006BOPA2_AB_Plate5 | AB_Plate5 | GoldenGate | 94 | 1536 | 144,384 |
2006BOPA2_BA_Plate7 | BA_Plate7 | GoldenGate | 96 | 1536 | 147,456 |
2006BOPA2_MN_Plate3 | MN_Plate3 | GoldenGate | 96 | 1536 | 147,456 |
2006BOPA2_MT_Plate10 | MT_Plate10 | GoldenGate | 96 | 1536 | 147,456 |
2006BOPA2_N2_Plate8 | N2_Plate8 | GoldenGate | 96 | 1536 | 147,456 |
2006BOPA2_N6_Plate9 | N6_Plate9 | GoldenGate | 96 | 1536 | 147,456 |
2006BOPA2_VT_Plate1 | VT_Plate1 | GoldenGate | 96 | 1536 | 147,456 |
2006BOPA2_WA_Plate4 | WA_Plate4 | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA1_AB_Plate5 | USDA-Aberdeen samples | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA1_UT_Plate6 | Utah State samples | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA1_BA_Plate7 | BARI samples | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA1_MN_Plate3 | U of Minnesota samples | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA1_MT_Plate10 | 2007 Montana State samples | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA1_N2_Plate8 | NDSU 2 row samples | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA1_N6_Plate9 | NDSU 6 row samples | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA1_OR_Plate2 | Oregon State samples | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA1_VT_Plate1 | Virgina Tech samples | GoldenGate | 92 | 1536 | 141,312 |
2007BOPA1_WA_Plate4 | Washington State samples | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA2_AB_Plate5 | USDA-Aberdeen samples | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA2_UT_Plate6 | Utah State samples | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA2_BA_Plate7 | BARI samples | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA2_MN_Plate3 | U of Minnesota samples | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA2_MT_Plate10 | Montana State samples | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA2_N2_Plate8 | NDSU 2 row samples | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA2_N6_Plate9 | NDSU 6 row samples | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA2_OR_Plate2 | Oregon State samples | GoldenGate | 96 | 1536 | 147,456 |
2007BOPA2_VT_Plate1 | Virginia Tech samples | GoldenGate | 92 | 1536 | 141,312 |
2007BOPA2_WA_Plate4 | Washington State samples | GoldenGate | 96 | 1536 | 147,456 |
2006BOPA2_OR_Plate2 | OR_Plate2 | GoldenGate | 96 | 1536 | 147,456 |
POPA3_CAPcore | CC_POPA3_Mapping | GoldenGate | 96 | 1536 | 147,456 |
POPA3_OWB_Mapping | OWB_POPA3 | GoldenGate | 96 | 1536 | 147,456 |
POPA3_Steptoe-Morex_Mapping | SM_POPA3 | GoldenGate | 96 | 1536 | 147,456 |
POPA3_Morex-Barke_Mapping | MB_POPA3 | GoldenGate | 96 | 1536 | 147,456 |
POPA2_Morex-Barke_Mapping | MB_POPA2 | GoldenGate | 96 | 1536 | 147,456 |
POPA2_CAPcore | CC_POPA2_Mapping | GoldenGate | 96 | 1536 | 147,456 |
POPA2_OWB_Mapping | OWB_POPA2 | GoldenGate | 96 | 1536 | 147,456 |
POPA2_Steptoe-Morex_Mapping | SM_All_POPA2 | GoldenGate | 153 | 3072 | 470,016 |
2008BOPA1_AB_Plate5 | AB_Plate5 | GoldenGate | 96 | 1536 | 147,456 |
2008BOPA2_AB_Plate5 | AB_Plate5 | GoldenGate | 96 | 1536 | 147,456 |
2008BOPA1_BA_Plate7 | BA_Plate7 | GoldenGate | 96 | 1536 | 147,456 |
2008BOPA2_BA_Plate7 | BA_Plate7 | GoldenGate | 96 | 1536 | 147,456 |
2008BOPA1_MN_Plate3 | MN_Plate3 | GoldenGate | 96 | 1536 | 147,456 |
2008BOPA2_MN_Plate3 | MN_Plate3 | GoldenGate | 96 | 1536 | 147,456 |
2008BOPA1_N2_Plate8 | N2_Plate8 | GoldenGate | 96 | 1536 | 147,456 |
2008BOPA2_N2_Plate8 | N2_Plate8 | GoldenGate | 96 | 1536 | 147,456 |
2008BOPA1_N6_Plate9 | N6_Plate9 | GoldenGate | 96 | 1536 | 147,456 |
2008BOPA2_N6_Plate9 | N6_Plate9 | GoldenGate | 96 | 1536 | 147,456 |
2008BOPA1_OR_Plate2 | OR_Plate2 | GoldenGate | 96 | 1536 | 147,456 |
2008BOPA2_OR_Plate2 | OR_Plate2 | GoldenGate | 96 | 1536 | 147,456 |
2008BOPA1_UT_Plate6 | UT_Plate6 | GoldenGate | 96 | 1536 | 147,456 |
2008BOPA2_UT_Plate6 | UT_Plate6 | GoldenGate | 96 | 1536 | 147,456 |
2008BOPA1_VT_Plate1 | VT_Plate1 | GoldenGate | 82 | 1536 | 125,952 |
2008BOPA2_VT_Plate1 | VT_Plate1 | GoldenGate | 82 | 1536 | 125,952 |
2008BOPA1_WA_Plate4 | WA_Plate4 | GoldenGate | 96 | 1536 | 147,456 |
2008BOPA2_WA_Plate4 | WA_Plate4 | GoldenGate | 96 | 1536 | 147,456 |
2008BOPA1_MT_Plate10 | MT_Plate10 | GoldenGate | 96 | 1536 | 147,456 |
2008BOPA2_MT_Plate10 | MT_Plate10 | GoldenGate | 96 | 1536 | 147,456 |
POPA1-2_CAPcore | CC_POPA1 | GoldenGate | 104 | 1524 | 158,496 |
POPA1_Morex-Barke_Mapping | MB_POPA1 | GoldenGate | 96 | 1524 | 146,304 |
POPA1_Oregon_Wolf_Barley_Mapping | OWB_POPA1 | GoldenGate | 95 | 1524 | 144,780 |
POPA1_Steptoe_Morex_Mapping | SM_POPA1 | GoldenGate | 152 | 1524 | 231,648 |
2006BOPA2_UT_Plate6 | UT_Plate6 | GoldenGate | 96 | 1536 | 147,456 |
2009BOPA1_AB_Plate5 | AB_BOPA1 | GoldenGate | 96 | 1536 | 147,456 |
2009BOPA1_BA_Plate7 | BA_BOPA1 | GoldenGate | 96 | 1536 | 147,456 |
2009BOPA1_MN_Plate3 | MN_BOPA1 | GoldenGate | 96 | 3072 | 294,912 |
2009BOPA1_MT_Plate10 | MT_BOPA1 | GoldenGate | 96 | 1536 | 147,456 |
2009BOPA1_N2_Plate8 | N2_BOPA1 | GoldenGate | 96 | 1536 | 147,456 |
2009BOPA1_N6_Plate9 | N6_BOPA1 | GoldenGate | 96 | 1536 | 147,456 |
2009BOPA1_OR_Plate2 | OR_BOPA1 | GoldenGate | 96 | 3072 | 294,912 |
2009BOPA1_UT_Plate6 | UT_BOPA1 | GoldenGate | 96 | 1536 | 147,456 |
2009BOPA1_VT_Plate1 | VT_BOPA1 | GoldenGate | 92 | 1536 | 141,312 |
2009BOPA1_WA_Plate4 | WA_BOPA1 | GoldenGate | 96 | 1536 | 147,456 |
2009BOPA2_BA_Plate7 | BA_BOPA2 | GoldenGate | 96 | 1536 | 147,456 |
2009BOPA2_MT_Plate10 | MT_BOPA2 | GoldenGate | 96 | 1536 | 147,456 |
2009BOPA2_N2_Plate8 | N2_BOPA2 | GoldenGate | 96 | 1536 | 147,456 |
2009BOPA2_N6_Plate9 | N6_BOPA2 | GoldenGate | 96 | 1536 | 147,456 |
2009BOPA2_UT_Plate6 | UT_BOPA2 | GoldenGate | 96 | 1536 | 147,456 |
2009BOPA2_VT_Plate1 | VT_BOPA2 | GoldenGate | 92 | 1536 | 141,312 |
2009BOPA2_WA_Plate4 | WA_BOPA2 | GoldenGate | 96 | 1536 | 147,456 |
2009BOPA2_AB_Plate5 | AB_BOPA2 | GoldenGate | 96 | 1536 | 147,456 |
2011_9K_NB_allplates | BarleyNB_9K | Infinium 9K | 2419 | 6913 | 16,722,547 |
CAPV2011_MN_9K | MN_9K | Infinium 9K | 95 | 6684 | 634,980 |
VC_FHB2010_384 | VC_FHB10 | VeraCode | 1896 | 384 | 728,064 |
2007BOPA1_MN_PRECAP | MN_PRECAP | GoldenGate | 241 | 1454 | 350,414 |
2010BOPA1_MN_GS_PARENTS | MN_GSPARENTS | GoldenGate | 161 | 1536 | 247,296 |
VC_MNSC2_2011_384 | VC_MNSC2 | VeraCode | 1920 | 384 | 737,280 |
VC_MNSC3_2012_384 | VC_MNSC3 | VeraCode | 1247 | 383 | 477,601 |
VC_MNWC1_2011_384 | VC_MNWC1 | VeraCode | 754 | 383 | 288,782 |
VC_MNWC2_2012_384 | VC_MNWC2 | VeraCode | 768 | 384 | 294,912 |
2011BOPA1_MN_WC0 | MN_GSWC0 | GoldenGate | 45 | 1536 | 69,120 |
MorexBarke_GBS_2012 | MxB_GBS | GBS restriction site | 91 | 21385 | 1,946,035 |
VC_MNWC3_2013_384 | VC_MNWC3 | VeraCode | 287 | 384 | 110,208 |
Ethiopia_Eritrea_9K | ETH_ERI_9K | Infinium 9K | 298 | 6702 | 1,997,196 |
TCFW6_LTT_9K | LTT_BOPA | Infinium 9K | 768 | 7203 | 5,531,904 |
VC_MNWC4_2013_384 | VC_MNWC4 | VeraCode | 768 | 384 | 294,912 |
WBIP_9K_Parents | WildParents9K | Infinium 9K | 26 | 7308 | 190,008 |
OWB_GBS_2012 | OWB_GBS | GBS restriction site | 82 | 34396 | 2,820,472 |
9K_MN_CAP6_2013 | 9K_MN_CAP6 | Infinium 9K | 192 | 7864 | 1,509,888 |
9K_MN_GEN10_2013 | 9K_MN_GEN10 | Infinium 9K | 146 | 7864 | 1,148,144 |
BOPA1_MN_WB_2011 | BOPA1_MN_WB | Infinium 9K | 58 | 3072 | 178,176 |
2006BOPA1_UT_Plate6 | UT_Plate6 | GoldenGate | 96 | 1536 | 147,456 |
2014_NDSU_9K | 2014_NDSU_GENO | Infinium 9K | 628 | 6695 | 4,204,460 |
WBIP384_ABNAM_2012 | WBIP_384 | VeraCode | 822 | 384 | 315,648 |
WBIP384_HOUH_2013 | HOUH_384 | VeraCode | 219 | 384 | 84,096 |
2015N2PYT | 2015_NDSU_GENO | Infinium 9K | 453 | 363 | 164,439 |
2016_HapMap_WEC | JH_HapMap | exome capture | 267 | 1167749 | 311,788,983 |
2016N2PYTA | 2016_NDSU_PYTA | Infinium 9K | 453 | 430 | 194,790 |
2016_N2_PYTBC | 2016NDSUPYTBC | Infinium 9K | 308 | 321 | 98,868 |
2017_NDSU_Yuma_2R | 2017N2YUMA | Infinium 9K | 2577 | 476 | 1,226,652 |
2018_NDSU_Yuma_2R | 2018N2YUMA | Infinium 9K | 2100 | 462 | 970,200 |
2016GBS_WBDC | MNWBDC_GBS | GBS restriction site | 314 | 50842 | 15,964,388 |
2015iSelect_MN_plate1 | iSelect_barley_11491263_A.bpm | Infinium 9K | 93 | 7861 | 731,073 |
2019N2YUMA | 2019_NDSU_Yuma_2R | Infinium 9K | 2169 | 457 | 991,233 |
2015GBS_MN | MN_GBS_S15 | GBS restriction site | 1467 | 235216 | 345,061,872 |
UMN_NSGC_GWAS | MN_GWAS | GBS restriction site | 748 | 69607 | 52,066,036 |
2018_CCRU_50K | CCRU_50K | Infinium 50K | 175 | 44037 | 7,706,475 |
2020_NDSU_Eurofins | 2020NDSU | Infinium 9K | 1695 | 530 | 898,350 |
total | 792,653,226 |