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  T3/Barley

Map Sets

This table lists the total markers in each map. If a marker is not in the the selected map set then it will be assigned to chromosome 0.

selectmarkers
(total)		markers
(in selection)		map set namecomment (select item for complete text)
4608
UCR04162008 Consensus Map from the Close Lab, UC Riverside. The map contains only SNPs (2943 of them) and is a
2383
OWB_2383OWB_2383 Hayes Lab; the 722 bPb type DArT marker mapped in the OWB, 458 markers were used to develop
1380
Steptoe x MorexMap is from Table S1, Additional File 3 of Based on supplemental data file in Close, T. J., Bhat, P.
1652
Morex x BarkeBased on supplemental data file in Close, T. J., Bhat, P. R., Lonardi, S., Wu, Y., Rostoks, N., Rams
34396
Oregon Wolfe Barley, GBS 201235,000K marker GBS map for the Oregon Wolfe Barley population. From http://www.wheatgenetics.org/ind
21386
Morex x Barke, GBS 2012Data contributed by Jesse Poland, July 2012.
2994
Barley, 2011 OPA, ConsensusConsensus maps from Munoz-Amatriain, et al., (2011) The Plant Journal 4:238. Note, in T3, POPA names
7842
Barley, 2012 SNP, JHuttonSNP map with BOPA and SCRI markers. Morex x Barke map published by Comadran et al. (2012) Data from
5665
iSelect_2013Consensus_AllSNPsConsensus map from Morex x Barke iSelect SNP (Comadran et al. 2012) and mapped POPA SNPs from Munoz
5198
iSelect_2013Consensus_ChipSNPsConsensus map from Morex x Barke iSelect SNP (Comadran et al. 2012) and mapped POPA SNPs from Munoz
39107
Morex 2012, IBSCA physical map generated with BLAST and the barley genome assembly in Ensembl Plants version 082214v
51278
Morex 2016, IBSCA physical map generated with BLAST and the barley cv. Morex genome assembly by IBSC 2016
1673514
Morex 2016, IBSC, GBSA physical map generated with BLAST and the barley cv. Morex genome assembly by IBSC 2016, only GBS
44037
Barley50kA physical map of the Barley 50K array.




If markers are selected, this count will report the number of selected markers in each of the maps.
If lines are selected, this count will report the number of genotyped markers for those lines that are in each of the maps.

In 2009 the Toronto International Data Release Workshop agreed on a policy statement about prepublication data sharing. Accordingly, the data producers are making many of the datasets in T3 available prior to publication of a global analysis. Guidelines for appropriate sharing of these data are given in the excerpt from the Toronto Statement

I agree to the Data Usage Policy as specified in Toronto Statement.