Genotyping experiment POPA2_Morex-Barke_Mapping
Description
| Experiment Short Name | MB_POPA2 |
| Platform | GoldenGate |
| Data Program | UC Riverside Close Lab (UCR) |
| Breeding Program | Mapping: Morex-Barke (MB) |
| OPA Name | POPA2 |
| Processing Date | 3/18/2008 |
| Software | Illumina GenomeStudio |
| Software version | 2010.3 |
| Comments |
1536 markers were assayed for 96 lines.
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| Removed by filtering | Remaining |
| 956 markers have a minor allele frequency (MAF) less than 5%
232 markers are missing more than 10% of data 962 markers removed | 574 markers |
Maximum Missing Data: %
Minimum MAF: %
Additional files available
| Samples (germplasm lines) | POPA2_samplesheet_03182008.csv |
| Manifest (markers used) | GS0007186-OPA.opa |
| Cluster File | POPA2_BS_060920_070522_080318.EGT |
| Raw data | POPA2_MB_1566313026.zip |