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  T3/Barley

Genotyping experiment 2009BOPA2_BA_Plate7

Description

Experiment Short NameBA_BOPA2
PlatformGoldenGate
Data ProgramUSDA-ARS Fargo, ND (NDG)
Breeding ProgramBusch Agricultural Resources Inc (BA)
OPA NameBOPA2
Processing Date05/06/2010
SoftwareIllumina Genome Studio
Software version2010.3
Comments

1536 markers were assayed for 96 lines.

(lines and markers)

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Removed by filteringRemaining
734 markers have a minor allele frequency (MAF) less than 5%
112 markers are missing more than 10% of data
739 markers removed
797 markers

Maximum Missing Data: %     Minimum MAF: %    



Additional files available

Samples (germplasm lines)2009CAPplate7BASampleSheetBOPA2rev.csv
Manifest (markers used)GS0010598-OPA.opa
Cluster FileBOPA2PooledSamples2009.EGT
Raw data

In 2009 the Toronto International Data Release Workshop agreed on a policy statement about prepublication data sharing. Accordingly, the data producers are making many of the datasets in T3 available prior to publication of a global analysis. Guidelines for appropriate sharing of these data are given in the excerpt from the Toronto Statement

I agree to the Data Usage Policy as specified in Toronto Statement.