Genotyping experiment 2007BOPA1_VT_Plate1
Description
| Experiment Short Name | Virgina Tech samples |
| Platform | GoldenGate |
| Data Program | USDA-ARS Fargo, ND (NDG) |
| Breeding Program | Virginia Tech (VT) |
| OPA Name | BOPA1 |
| Processing Date | 3/18/2008 |
| Software | Illumina GenomeStudio |
| Software version | 2010.3 |
| Comments |
1536 markers were assayed for 92 lines.
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| Removed by filtering | Remaining |
| 642 markers have a minor allele frequency (MAF) less than 5%
96 markers are missing more than 10% of data 643 markers removed | 893 markers |
Maximum Missing Data: %
Minimum MAF: %
Additional files available
| Samples (germplasm lines) | Sample_Sheet_2007plate1VA.csv |
| Manifest (markers used) | GS0007511-OPA.opa |
| Cluster File | 2007BOPA1_26april08.EGT |
| Raw data | BOPA1_2007_4018208021.zip |