Databases available for ViroBLAST

Nucleotide sequence databasesSource linkAssembly
Oat Markers in T3 Illumina SNP Alleles August 7, 2017
Oat Seed Ref 100 Analysis and annotation of the hexaploid oat seed transcriptome July 11, 2013
Oat Seed Ref 90 Analysis and annotation of the hexaploid oat seed transcriptome
clustering to reduce the presence of redundant sequences
July 11, 2013
Hulless Oat (Avena Linn.) Transcriptome analysis of hexaploid hulless oat in response to salinity stressFebruary 13, 2017
Avena sativa v1.0 A-genome diploid Avena atlantica. Composed of 3417 scaffolds, spanning ~3.7 Gb, with an N50 of 11.86 Mb and a BUSCO estimated completeness of 97.6%January 13, 2018
ScanOats SW Belinda. Composed of 523,398 scaffolds, with an N50 0f 17.72 Mb and a BUSCO estimated completeness of 98.1%January 23, 2018